Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rc3h1Q4VGL6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Gm15371-201ENSMUST00000117057 784 ntBASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Gm17330-201ENSMUST00000221047 165 ntBASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Gm10012-201ENSMUST00000078252 192 ntBASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rc3h1Q4VGL6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Gm4984-201ENSMUST00000115987 360 ntBASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Gm13612-201ENSMUST00000119276 390 ntBASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rc3h1Q4VGL6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms