Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Trav11n-201ENSMUST00000200113 343 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 AC153505.1-201ENSMUST00000218819 1071 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 AC158355.1-201ENSMUST00000215895 1705 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Gm14234-201ENSMUST00000119539 845 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Gm11783-201ENSMUST00000119549 885 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 CT573086.4-201ENSMUST00000226729 342 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Gm14451-201ENSMUST00000121581 1542 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Mir8115-201ENSMUST00000184992 119 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Gm37201-201ENSMUST00000191845 523 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Gm45398-201ENSMUST00000210561 165 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 CT030704.2-201ENSMUST00000228887 494 ntBASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
Herc2Q4U2R1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Carlr-201ENSMUST00000181515 2574 ntBASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Gm28071-201ENSMUST00000190355 478 ntBASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Gm43447-201ENSMUST00000198471 1535 ntBASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Mir698-201ENSMUST00000102164 109 ntBASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Herc2Q4U2R1 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms