Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Znf48Q3US17 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.45□□□□□ -0.58
Znf48Q3US17 Gm12091-201ENSMUST00000146791 830 ntBASIC11.45□□□□□ -0.58
Znf48Q3US17 Gm8602-201ENSMUST00000184045 607 ntBASIC11.45□□□□□ -0.58
Znf48Q3US17 Gm29667-201ENSMUST00000190817 490 ntBASIC11.45□□□□□ -0.58
Znf48Q3US17 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.45□□□□□ -0.58
Znf48Q3US17 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Znf48Q3US17 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.45□□□□□ -0.58
Znf48Q3US17 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Znf48Q3US17 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Znf48Q3US17 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.45□□□□□ -0.58
Znf48Q3US17 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Znf48Q3US17 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Znf48Q3US17 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Znf48Q3US17 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
Znf48Q3US17 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Znf48Q3US17 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.44□□□□□ -0.58
Znf48Q3US17 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC11.44□□□□□ -0.58
Znf48Q3US17 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC11.44□□□□□ -0.58
Znf48Q3US17 Gm29013-201ENSMUST00000187431 237 ntBASIC11.44□□□□□ -0.58
Znf48Q3US17 Gm18062-201ENSMUST00000208020 547 ntBASIC11.44□□□□□ -0.58
Znf48Q3US17 Gm18055-201ENSMUST00000208254 547 ntBASIC11.44□□□□□ -0.58
Znf48Q3US17 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.44□□□□□ -0.58
Znf48Q3US17 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.44□□□□□ -0.58
Znf48Q3US17 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.44□□□□□ -0.58
Znf48Q3US17 Gm26226-201ENSMUST00000082509 116 ntBASIC11.44□□□□□ -0.58
Znf48Q3US17 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.44□□□□□ -0.58
Znf48Q3US17 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.44□□□□□ -0.58
Znf48Q3US17 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.44□□□□□ -0.58
Znf48Q3US17 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Znf48Q3US17 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Znf48Q3US17 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Znf48Q3US17 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms