Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cks1brtQ3UNC9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Gm15593-201ENSMUST00000122085 1008 ntBASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Gm43799-201ENSMUST00000201845 579 ntBASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 AC102291.3-201ENSMUST00000226566 405 ntBASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Gm12020-201ENSMUST00000119030 2042 ntBASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1brtQ3UNC9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Gm43134-201ENSMUST00000199434 1886 ntBASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Gm5837-201ENSMUST00000191844 1369 ntBASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Gm20760-201ENSMUST00000179197 648 ntBASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1brtQ3UNC9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms