Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trappc13Q3TIR1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Gm27533-201ENSMUST00000183800 152 ntBASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Gm21470-201ENSMUST00000187680 696 ntBASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.79□□□□□ -0.36
Trappc13Q3TIR1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Gm6736-201ENSMUST00000166583 948 ntBASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Gm25144-201ENSMUST00000179561 110 ntBASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Gm25352-201ENSMUST00000179815 110 ntBASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Gm27702-201ENSMUST00000184512 56 ntBASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Gm9229-201ENSMUST00000222777 126 ntBASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trappc13Q3TIR1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trappc13Q3TIR1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trappc13Q3TIR1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
Trappc13Q3TIR1 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trappc13Q3TIR1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Trappc13Q3TIR1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms