Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Gm4726-201ENSMUST00000135604 736 ntBASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Gm6019-201ENSMUST00000148369 736 ntBASIC7.06□□□□□ -1.28
Ush2AQ2QI47 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Gm35713-201ENSMUST00000210516 199 ntBASIC7.06□□□□□ -1.28
Ush2AQ2QI47 AC105408.1-201ENSMUST00000227771 802 ntBASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Gm42632-201ENSMUST00000201707 2411 ntBASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Ush2AQ2QI47 Gm44056-201ENSMUST00000204623 1427 ntBASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm11502-201ENSMUST00000120917 1211 ntBASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 CT030704.2-201ENSMUST00000228887 494 ntBASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Gm43969-201ENSMUST00000204833 535 ntBASIC7.05□□□□□ -1.28
Ush2AQ2QI47 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Ush2AQ2QI47 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms