Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Thbs3Q05895 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.06□□□□□ -0.48
Thbs3Q05895 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.06□□□□□ -0.48
Thbs3Q05895 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.06□□□□□ -0.48
Thbs3Q05895 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 Gm9797-201ENSMUST00000052902 613 ntBASIC12.06□□□□□ -0.48
Thbs3Q05895 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.06□□□□□ -0.48
Thbs3Q05895 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Thbs3Q05895 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.06□□□□□ -0.48
Thbs3Q05895 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Thbs3Q05895 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Thbs3Q05895 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.06□□□□□ -0.48
Thbs3Q05895 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Gm15321-201ENSMUST00000121290 288 ntBASIC12.05□□□□□ -0.48
Thbs3Q05895 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.05□□□□□ -0.48
Thbs3Q05895 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.05□□□□□ -0.48
Thbs3Q05895 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Thbs3Q05895 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs3Q05895 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.04□□□□□ -0.48
Thbs3Q05895 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Thbs3Q05895 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.04□□□□□ -0.48
Thbs3Q05895 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.04□□□□□ -0.48
Thbs3Q05895 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.04□□□□□ -0.48
Thbs3Q05895 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.04□□□□□ -0.48
Thbs3Q05895 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs3Q05895 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms