Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gabpb1Q00420 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Gabpb1Q00420 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gabpb1Q00420 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gabpb1Q00420 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Gabpb1Q00420 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.95□□□□□ -0.18
Gabpb1Q00420 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Gabpb1Q00420 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.94□□□□□ -0.18
Gabpb1Q00420 Gm27306-201ENSMUST00000183970 107 ntBASIC13.94□□□□□ -0.18
Gabpb1Q00420 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.94□□□□□ -0.18
Gabpb1Q00420 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.94□□□□□ -0.18
Gabpb1Q00420 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Gabpb1Q00420 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Gm4875-201ENSMUST00000118257 786 ntBASIC13.93□□□□□ -0.18
Gabpb1Q00420 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.93□□□□□ -0.18
Gabpb1Q00420 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.93□□□□□ -0.18
Gabpb1Q00420 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.93□□□□□ -0.18
Gabpb1Q00420 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.93□□□□□ -0.18
Gabpb1Q00420 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Gabpb1Q00420 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Gabpb1Q00420 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Gabpb1Q00420 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.92□□□□□ -0.18
Gabpb1Q00420 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Gm15240-201ENSMUST00000118156 720 ntBASIC13.92□□□□□ -0.18
Gabpb1Q00420 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.92□□□□□ -0.18
Gabpb1Q00420 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Gabpb1Q00420 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Gabpb1Q00420 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms