Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Npas1P97459 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.51□□□□□ -0.57
Npas1P97459 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.51□□□□□ -0.57
Npas1P97459 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.51□□□□□ -0.57
Npas1P97459 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.51□□□□□ -0.57
Npas1P97459 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.51□□□□□ -0.57
Npas1P97459 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC11.51□□□□□ -0.57
Npas1P97459 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC11.51□□□□□ -0.57
Npas1P97459 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.51□□□□□ -0.57
Npas1P97459 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.51□□□□□ -0.57
Npas1P97459 Gm10154-201ENSMUST00000084445 354 ntBASIC11.51□□□□□ -0.57
Npas1P97459 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Npas1P97459 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.51□□□□□ -0.57
Npas1P97459 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Npas1P97459 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Npas1P97459 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.51□□□□□ -0.57
Npas1P97459 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.51□□□□□ -0.57
Npas1P97459 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Npas1P97459 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Npas1P97459 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.51□□□□□ -0.57
Npas1P97459 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Npas1P97459 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Npas1P97459 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Npas1P97459 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Npas1P97459 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.5□□□□□ -0.57
Npas1P97459 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Npas1P97459 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Npas1P97459 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.5□□□□□ -0.57
Npas1P97459 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.5□□□□□ -0.57
Npas1P97459 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Npas1P97459 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.5□□□□□ -0.57
Npas1P97459 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Npas1P97459 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.5□□□□□ -0.57
Npas1P97459 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Npas1P97459 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Npas1P97459 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Npas1P97459 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms