Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.56□□□□□ -0.24
Shox2P70390 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.56□□□□□ -0.24
Shox2P70390 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Shox2P70390 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Shox2P70390 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Shox2P70390 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.56□□□□□ -0.24
Shox2P70390 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Shox2P70390 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Shox2P70390 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.56□□□□□ -0.24
Shox2P70390 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.55□□□□□ -0.24
Shox2P70390 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Shox2P70390 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Shox2P70390 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.55□□□□□ -0.24
Shox2P70390 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.55□□□□□ -0.24
Shox2P70390 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.55□□□□□ -0.24
Shox2P70390 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Shox2P70390 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Shox2P70390 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.55□□□□□ -0.24
Shox2P70390 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Shox2P70390 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Shox2P70390 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.54□□□□□ -0.24
Shox2P70390 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.54□□□□□ -0.24
Shox2P70390 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Shox2P70390 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.54□□□□□ -0.24
Shox2P70390 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.54□□□□□ -0.24
Shox2P70390 Gm15483-201ENSMUST00000120338 456 ntBASIC13.54□□□□□ -0.24
Shox2P70390 Gm13597-201ENSMUST00000121239 375 ntBASIC13.54□□□□□ -0.24
Shox2P70390 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.54□□□□□ -0.24
Shox2P70390 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.54□□□□□ -0.24
Shox2P70390 Gm6659-201ENSMUST00000174752 547 ntBASIC13.54□□□□□ -0.24
Shox2P70390 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Shox2P70390 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.54□□□□□ -0.24
Shox2P70390 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.54□□□□□ -0.24
Shox2P70390 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.54□□□□□ -0.24
Shox2P70390 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Shox2P70390 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Shox2P70390 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Shox2P70390 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Shox2P70390 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Shox2P70390 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.53□□□□□ -0.24
Shox2P70390 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.53□□□□□ -0.24
Shox2P70390 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Shox2P70390 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.53□□□□□ -0.24
Shox2P70390 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shox2P70390 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms