Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.86□□□□□ -0.35
Six5P70178 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.86□□□□□ -0.35
Six5P70178 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.86□□□□□ -0.35
Six5P70178 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six5P70178 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.86□□□□□ -0.35
Six5P70178 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six5P70178 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.86□□□□□ -0.35
Six5P70178 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Six5P70178 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six5P70178 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six5P70178 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.86□□□□□ -0.35
Six5P70178 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.86□□□□□ -0.35
Six5P70178 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
Six5P70178 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Six5P70178 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.86□□□□□ -0.35
Six5P70178 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six5P70178 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six5P70178 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six5P70178 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Six5P70178 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Six5P70178 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Six5P70178 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.85□□□□□ -0.35
Six5P70178 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Six5P70178 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.85□□□□□ -0.35
Six5P70178 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.85□□□□□ -0.35
Six5P70178 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.85□□□□□ -0.35
Six5P70178 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Six5P70178 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.85□□□□□ -0.35
Six5P70178 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.85□□□□□ -0.35
Six5P70178 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.85□□□□□ -0.35
Six5P70178 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.85□□□□□ -0.35
Six5P70178 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.85□□□□□ -0.35
Six5P70178 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.85□□□□□ -0.35
Six5P70178 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.85□□□□□ -0.35
Six5P70178 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Six5P70178 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Six5P70178 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.84□□□□□ -0.35
Six5P70178 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Gm15321-201ENSMUST00000121290 288 ntBASIC12.84□□□□□ -0.35
Six5P70178 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.84□□□□□ -0.35
Six5P70178 Auts2-212ENSMUST00000178555 309 ntBASIC12.84□□□□□ -0.35
Six5P70178 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.84□□□□□ -0.35
Six5P70178 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Six5P70178 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Six5P70178 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.84□□□□□ -0.35
Six5P70178 Syt7-204ENSMUST00000223586 1344 ntBASIC12.84□□□□□ -0.35
Six5P70178 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Six5P70178 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Six5P70178 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Six5P70178 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Six5P70178 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Six5P70178 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.83□□□□□ -0.36
Six5P70178 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Six5P70178 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Six5P70178 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms