Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.43□□□□□ -0.74
Vamp3P63024 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.43□□□□□ -0.74
Vamp3P63024 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Vamp3P63024 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.43□□□□□ -0.74
Vamp3P63024 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.43□□□□□ -0.74
Vamp3P63024 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Vamp3P63024 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Vamp3P63024 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Vamp3P63024 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Vamp3P63024 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.43□□□□□ -0.74
Vamp3P63024 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Vamp3P63024 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.42□□□□□ -0.74
Vamp3P63024 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.42□□□□□ -0.74
Vamp3P63024 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Vamp3P63024 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Vamp3P63024 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC10.42□□□□□ -0.74
Vamp3P63024 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC10.42□□□□□ -0.74
Vamp3P63024 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.42□□□□□ -0.74
Vamp3P63024 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Vamp3P63024 Gm3272-201ENSMUST00000181181 1229 ntBASIC10.42□□□□□ -0.74
Vamp3P63024 Gm42642-201ENSMUST00000200683 355 ntBASIC10.42□□□□□ -0.74
Vamp3P63024 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.42□□□□□ -0.74
Vamp3P63024 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC10.42□□□□□ -0.74
Vamp3P63024 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Gm9987-201ENSMUST00000069768 567 ntBASIC10.42□□□□□ -0.74
Vamp3P63024 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.42□□□□□ -0.74
Vamp3P63024 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Vamp3P63024 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.42□□□□□ -0.74
Vamp3P63024 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Vamp3P63024 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Vamp3P63024 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Vamp3P63024 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Gm26039-201ENSMUST00000158152 144 ntBASIC10.41□□□□□ -0.74
Vamp3P63024 Gm10499-201ENSMUST00000174094 934 ntBASIC10.41□□□□□ -0.74
Vamp3P63024 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Vamp3P63024 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Vamp3P63024 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms