Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cks1bP61025 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cks1bP61025 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC9.81□□□□□ -0.84
Cks1bP61025 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Cks1bP61025 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC9.8□□□□□ -0.84
Cks1bP61025 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Cks1bP61025 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC9.8□□□□□ -0.84
Cks1bP61025 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cks1bP61025 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Gm7222-201ENSMUST00000117512 906 ntBASIC9.8□□□□□ -0.84
Cks1bP61025 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cks1bP61025 Gm9726-201ENSMUST00000180321 678 ntBASIC9.8□□□□□ -0.84
Cks1bP61025 Gm17807-201ENSMUST00000186869 298 ntBASIC9.8□□□□□ -0.84
Cks1bP61025 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC9.8□□□□□ -0.84
Cks1bP61025 AC155729.1-201ENSMUST00000227758 544 ntBASIC9.8□□□□□ -0.84
Cks1bP61025 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Cks1bP61025 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cks1bP61025 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cks1bP61025 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Cks1bP61025 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC9.79□□□□□ -0.84
Cks1bP61025 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.79□□□□□ -0.84
Cks1bP61025 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Gm15593-201ENSMUST00000122085 1008 ntBASIC9.79□□□□□ -0.84
Cks1bP61025 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC9.79□□□□□ -0.84
Cks1bP61025 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC9.79□□□□□ -0.84
Cks1bP61025 AC164567.1-201ENSMUST00000219185 960 ntBASIC9.79□□□□□ -0.84
Cks1bP61025 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cks1bP61025 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cks1bP61025 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.79□□□□□ -0.84
Cks1bP61025 AC125108.1-201ENSMUST00000218986 2330 ntBASIC9.79□□□□□ -0.84
Cks1bP61025 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cks1bP61025 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.79□□□□□ -0.84
Cks1bP61025 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cks1bP61025 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms