Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.34□□□□□ -0.11
NcanP55066 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.34□□□□□ -0.11
NcanP55066 Gm31256-201ENSMUST00000194705 506 ntBASIC14.34□□□□□ -0.11
NcanP55066 Gm17889-201ENSMUST00000198410 598 ntBASIC14.34□□□□□ -0.11
NcanP55066 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.34□□□□□ -0.11
NcanP55066 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.34□□□□□ -0.11
NcanP55066 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NcanP55066 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NcanP55066 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
NcanP55066 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NcanP55066 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NcanP55066 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NcanP55066 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NcanP55066 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NcanP55066 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
NcanP55066 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
NcanP55066 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.33□□□□□ -0.12
NcanP55066 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.33□□□□□ -0.12
NcanP55066 AA914427-201ENSMUST00000193194 1166 ntBASIC14.33□□□□□ -0.12
NcanP55066 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.33□□□□□ -0.12
NcanP55066 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.33□□□□□ -0.12
NcanP55066 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.33□□□□□ -0.12
NcanP55066 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.33□□□□□ -0.12
NcanP55066 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NcanP55066 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NcanP55066 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NcanP55066 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NcanP55066 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.33□□□□□ -0.12
NcanP55066 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.32□□□□□ -0.12
NcanP55066 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.32□□□□□ -0.12
NcanP55066 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.32□□□□□ -0.12
NcanP55066 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NcanP55066 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NcanP55066 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NcanP55066 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NcanP55066 Gm16202-201ENSMUST00000117532 544 ntBASIC14.31□□□□□ -0.12
NcanP55066 Gm15131-201ENSMUST00000119124 595 ntBASIC14.31□□□□□ -0.12
NcanP55066 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.31□□□□□ -0.12
NcanP55066 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Gm4607-201ENSMUST00000206649 577 ntBASIC14.31□□□□□ -0.12
NcanP55066 Gm13097-201ENSMUST00000210722 397 ntBASIC14.31□□□□□ -0.12
NcanP55066 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.31□□□□□ -0.12
NcanP55066 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.31□□□□□ -0.12
NcanP55066 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NcanP55066 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.31□□□□□ -0.12
NcanP55066 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.31□□□□□ -0.12
NcanP55066 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NcanP55066 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NcanP55066 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms