Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Msh6P54276 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msh6P54276 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Msh6P54276 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msh6P54276 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msh6P54276 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC17.27■□□□□ 0.35
Msh6P54276 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Msh6P54276 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC17.27■□□□□ 0.35
Msh6P54276 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC17.27■□□□□ 0.35
Msh6P54276 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Msh6P54276 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.27■□□□□ 0.35
Msh6P54276 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msh6P54276 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Msh6P54276 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.27■□□□□ 0.35
Msh6P54276 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Msh6P54276 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Msh6P54276 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Msh6P54276 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Msh6P54276 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC17.26■□□□□ 0.35
Msh6P54276 Gm13342-201ENSMUST00000121055 207 ntBASIC17.26■□□□□ 0.35
Msh6P54276 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.26■□□□□ 0.35
Msh6P54276 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Msh6P54276 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Msh6P54276 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.26■□□□□ 0.35
Msh6P54276 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.26■□□□□ 0.35
Msh6P54276 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Msh6P54276 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Msh6P54276 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.25■□□□□ 0.35
Msh6P54276 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.25■□□□□ 0.35
Msh6P54276 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.25■□□□□ 0.35
Msh6P54276 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Msh6P54276 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Msh6P54276 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.25■□□□□ 0.35
Msh6P54276 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Msh6P54276 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Msh6P54276 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Gm43056-201ENSMUST00000197865 2791 ntBASIC17.24■□□□□ 0.35
Msh6P54276 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.24■□□□□ 0.35
Msh6P54276 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.24■□□□□ 0.35
Msh6P54276 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Msh6P54276 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.24■□□□□ 0.35
Msh6P54276 Gm7029-201ENSMUST00000173226 450 ntBASIC17.24■□□□□ 0.35
Msh6P54276 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC17.24■□□□□ 0.35
Msh6P54276 Gm37497-201ENSMUST00000195830 798 ntBASIC17.24■□□□□ 0.35
Msh6P54276 Gm42627-201ENSMUST00000197347 224 ntBASIC17.24■□□□□ 0.35
Msh6P54276 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC17.24■□□□□ 0.35
Msh6P54276 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.24■□□□□ 0.35
Msh6P54276 Cts7-204ENSMUST00000225321 1257 ntBASIC17.24■□□□□ 0.35
Msh6P54276 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Msh6P54276 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.23■□□□□ 0.35
Msh6P54276 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Msh6P54276 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh6P54276 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Msh6P54276 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.23■□□□□ 0.35
Msh6P54276 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms