Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.03□□□□□ -0.16
ClgnP52194 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ClgnP52194 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ClgnP52194 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
ClgnP52194 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.03□□□□□ -0.16
ClgnP52194 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ClgnP52194 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ClgnP52194 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ClgnP52194 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.03□□□□□ -0.16
ClgnP52194 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.03□□□□□ -0.16
ClgnP52194 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
ClgnP52194 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ClgnP52194 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ClgnP52194 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ClgnP52194 Paupar-201ENSMUST00000194826 3482 ntBASIC14.02□□□□□ -0.16
ClgnP52194 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ClgnP52194 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClgnP52194 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
ClgnP52194 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ClgnP52194 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClgnP52194 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClgnP52194 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ClgnP52194 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ClgnP52194 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
ClgnP52194 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.02□□□□□ -0.17
ClgnP52194 Gm25948-201ENSMUST00000175334 112 ntBASIC14.02□□□□□ -0.17
ClgnP52194 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ClgnP52194 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.02□□□□□ -0.17
ClgnP52194 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.02□□□□□ -0.17
ClgnP52194 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ClgnP52194 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.02□□□□□ -0.17
ClgnP52194 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.01□□□□□ -0.17
ClgnP52194 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.01□□□□□ -0.17
ClgnP52194 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ClgnP52194 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
ClgnP52194 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.01□□□□□ -0.17
ClgnP52194 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ClgnP52194 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
ClgnP52194 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
ClgnP52194 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ClgnP52194 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Gm14767-201ENSMUST00000121559 586 ntBASIC14.01□□□□□ -0.17
ClgnP52194 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.01□□□□□ -0.17
ClgnP52194 Gm22175-201ENSMUST00000175007 78 ntBASIC14.01□□□□□ -0.17
ClgnP52194 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.01□□□□□ -0.17
ClgnP52194 Gm27680-201ENSMUST00000184192 160 ntBASIC14.01□□□□□ -0.17
ClgnP52194 Gm5425-201ENSMUST00000214125 459 ntBASIC14.01□□□□□ -0.17
ClgnP52194 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.01□□□□□ -0.17
ClgnP52194 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ClgnP52194 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms