Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.37□□□□□ -0.59
Nkx2-1P50220 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Nkx2-1P50220 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Gm44608-201ENSMUST00000206827 855 ntBASIC11.36□□□□□ -0.59
Nkx2-1P50220 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Nkx2-1P50220 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.35□□□□□ -0.59
Nkx2-1P50220 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.35□□□□□ -0.59
Nkx2-1P50220 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.35□□□□□ -0.59
Nkx2-1P50220 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.35□□□□□ -0.59
Nkx2-1P50220 Thap2-203ENSMUST00000218989 527 ntBASIC11.35□□□□□ -0.59
Nkx2-1P50220 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.35□□□□□ -0.59
Nkx2-1P50220 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Nkx2-1P50220 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms