Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Gm6222-201ENSMUST00000120787 396 ntBASIC14.28□□□□□ -0.12
LmnaP48678 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.28□□□□□ -0.12
LmnaP48678 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
LmnaP48678 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LmnaP48678 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LmnaP48678 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Gm18827-201ENSMUST00000188341 790 ntBASIC14.28□□□□□ -0.12
LmnaP48678 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LmnaP48678 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LmnaP48678 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
LmnaP48678 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LmnaP48678 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LmnaP48678 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LmnaP48678 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.27□□□□□ -0.12
LmnaP48678 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LmnaP48678 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LmnaP48678 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LmnaP48678 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LmnaP48678 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LmnaP48678 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.27□□□□□ -0.12
LmnaP48678 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LmnaP48678 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LmnaP48678 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LmnaP48678 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LmnaP48678 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.27□□□□□ -0.13
LmnaP48678 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.27□□□□□ -0.13
LmnaP48678 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.27□□□□□ -0.13
LmnaP48678 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.27□□□□□ -0.13
LmnaP48678 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.27□□□□□ -0.13
LmnaP48678 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.27□□□□□ -0.13
LmnaP48678 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
LmnaP48678 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.27□□□□□ -0.13
LmnaP48678 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LmnaP48678 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Gm45251-201ENSMUST00000209486 1465 ntBASIC14.26□□□□□ -0.13
LmnaP48678 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LmnaP48678 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.26□□□□□ -0.13
LmnaP48678 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.26□□□□□ -0.13
LmnaP48678 Gm8749-201ENSMUST00000117737 331 ntBASIC14.26□□□□□ -0.13
LmnaP48678 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Snora78-201ENSMUST00000158630 128 ntBASIC14.26□□□□□ -0.13
LmnaP48678 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LmnaP48678 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.26□□□□□ -0.13
LmnaP48678 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
LmnaP48678 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LmnaP48678 Gm18515-201ENSMUST00000219755 797 ntBASIC14.26□□□□□ -0.13
LmnaP48678 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms