Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Xcl1P47993 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
Xcl1P47993 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC8.86□□□□□ -0.99
Xcl1P47993 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Gm8749-201ENSMUST00000117737 331 ntBASIC8.86□□□□□ -0.99
Xcl1P47993 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC8.86□□□□□ -0.99
Xcl1P47993 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC8.86□□□□□ -0.99
Xcl1P47993 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Gm45058-201ENSMUST00000205810 766 ntBASIC8.86□□□□□ -0.99
Xcl1P47993 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC8.86□□□□□ -0.99
Xcl1P47993 Gm18101-201ENSMUST00000215769 548 ntBASIC8.86□□□□□ -0.99
Xcl1P47993 AC164567.1-201ENSMUST00000219185 960 ntBASIC8.86□□□□□ -0.99
Xcl1P47993 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Xcl1P47993 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Xcl1P47993 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC8.86□□□□□ -0.99
Xcl1P47993 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
Xcl1P47993 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Xcl1P47993 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC8.86□□□□□ -0.99
Xcl1P47993 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Xcl1P47993 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Xcl1P47993 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Xcl1P47993 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC8.85□□□□□ -0.99
Xcl1P47993 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC8.85□□□□□ -0.99
Xcl1P47993 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 AC131743.5-201ENSMUST00000220775 1618 ntBASIC8.85□□□□□ -0.99
Xcl1P47993 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Xcl1P47993 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC8.85□□□□□ -0.99
Xcl1P47993 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC8.85□□□□□ -0.99
Xcl1P47993 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Gm43353-201ENSMUST00000199224 1295 ntBASIC8.85□□□□□ -0.99
Xcl1P47993 Gm9172-201ENSMUST00000212092 954 ntBASIC8.85□□□□□ -0.99
Xcl1P47993 AC102291.3-201ENSMUST00000226566 405 ntBASIC8.85□□□□□ -0.99
Xcl1P47993 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Xcl1P47993 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Xcl1P47993 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Xcl1P47993 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Xcl1P47993 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Xcl1P47993 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Gm10176-201ENSMUST00000159707 2264 ntBASIC8.84□□□□□ -0.99
Xcl1P47993 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Gm8775-201ENSMUST00000170943 1327 ntBASIC8.84□□□□□ -0.99
Xcl1P47993 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Gm9252-201ENSMUST00000172364 1602 ntBASIC8.84□□□□□ -0.99
Xcl1P47993 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Xcl1P47993 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms