Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cd27P41272 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cd27P41272 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Cd27P41272 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cd27P41272 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11□□□□□ -0.65
Cd27P41272 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11□□□□□ -0.65
Cd27P41272 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11□□□□□ -0.65
Cd27P41272 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11□□□□□ -0.65
Cd27P41272 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Gm5866-201ENSMUST00000177881 973 ntBASIC11□□□□□ -0.65
Cd27P41272 Gm43094-201ENSMUST00000196549 921 ntBASIC11□□□□□ -0.65
Cd27P41272 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11□□□□□ -0.65
Cd27P41272 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Gm14752-201ENSMUST00000120719 2075 ntBASIC11□□□□□ -0.65
Cd27P41272 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Cd27P41272 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cd27P41272 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11□□□□□ -0.65
Cd27P41272 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cd27P41272 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cd27P41272 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cd27P41272 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Cd27P41272 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cd27P41272 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC10.99□□□□□ -0.65
Cd27P41272 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cd27P41272 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.99□□□□□ -0.65
Cd27P41272 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cd27P41272 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cd27P41272 Gm12859-201ENSMUST00000117834 427 ntBASIC10.99□□□□□ -0.65
Cd27P41272 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.99□□□□□ -0.65
Cd27P41272 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
Cd27P41272 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Cd27P41272 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cd27P41272 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Cd27P41272 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.99□□□□□ -0.65
Cd27P41272 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.99□□□□□ -0.65
Cd27P41272 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cd27P41272 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.99□□□□□ -0.65
Cd27P41272 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.99□□□□□ -0.65
Cd27P41272 Gm44443-201ENSMUST00000204396 5633 ntBASIC10.99□□□□□ -0.65
Cd27P41272 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cd27P41272 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.99□□□□□ -0.65
Cd27P41272 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms