Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.52□□□□□ -0.25
HmgclP38060 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.52□□□□□ -0.25
HmgclP38060 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.52□□□□□ -0.25
HmgclP38060 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.52□□□□□ -0.25
HmgclP38060 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
HmgclP38060 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.52□□□□□ -0.25
HmgclP38060 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.52□□□□□ -0.25
HmgclP38060 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.52□□□□□ -0.25
HmgclP38060 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.52□□□□□ -0.25
HmgclP38060 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
HmgclP38060 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
HmgclP38060 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.52□□□□□ -0.25
HmgclP38060 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
HmgclP38060 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
HmgclP38060 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
HmgclP38060 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.51□□□□□ -0.25
HmgclP38060 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HmgclP38060 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.51□□□□□ -0.25
HmgclP38060 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Gm15770-201ENSMUST00000117498 584 ntBASIC13.51□□□□□ -0.25
HmgclP38060 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.51□□□□□ -0.25
HmgclP38060 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HmgclP38060 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HmgclP38060 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HmgclP38060 Gm5279-201ENSMUST00000199575 745 ntBASIC13.51□□□□□ -0.25
HmgclP38060 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.51□□□□□ -0.25
HmgclP38060 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.51□□□□□ -0.25
HmgclP38060 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HmgclP38060 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HmgclP38060 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HmgclP38060 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
HmgclP38060 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.51□□□□□ -0.25
HmgclP38060 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HmgclP38060 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.5□□□□□ -0.25
HmgclP38060 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HmgclP38060 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HmgclP38060 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HmgclP38060 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.5□□□□□ -0.25
HmgclP38060 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.5□□□□□ -0.25
HmgclP38060 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
HmgclP38060 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
HmgclP38060 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.5□□□□□ -0.25
HmgclP38060 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.5□□□□□ -0.25
HmgclP38060 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.5□□□□□ -0.25
HmgclP38060 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
HmgclP38060 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
HmgclP38060 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
HmgclP38060 Gm28760-201ENSMUST00000185995 736 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 113.9 ms