Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sox5P35710 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sox5P35710 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sox5P35710 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sox5P35710 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sox5P35710 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Sox5P35710 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Sox5P35710 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.99□□□□□ -0.01
Sox5P35710 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sox5P35710 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sox5P35710 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sox5P35710 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.99□□□□□ -0.01
Sox5P35710 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sox5P35710 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Sox5P35710 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Sox5P35710 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
Sox5P35710 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sox5P35710 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sox5P35710 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Sox5P35710 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sox5P35710 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.98□□□□□ -0.01
Sox5P35710 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.98□□□□□ -0.01
Sox5P35710 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.98□□□□□ -0.01
Sox5P35710 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.98□□□□□ -0.01
Sox5P35710 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Sox5P35710 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.98□□□□□ -0.01
Sox5P35710 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Sox5P35710 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox5P35710 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox5P35710 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Sox5P35710 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.97□□□□□ -0.01
Sox5P35710 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.97□□□□□ -0.01
Sox5P35710 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.97□□□□□ -0.01
Sox5P35710 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sox5P35710 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox5P35710 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 AW822252-206ENSMUST00000208904 237 ntBASIC14.97□□□□□ -0.01
Sox5P35710 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Sox5P35710 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.97□□□□□ -0.01
Sox5P35710 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Sox5P35710 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Sox5P35710 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sox5P35710 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox5P35710 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms