Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RetP35546 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.88□□□□□ -0.35
RetP35546 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RetP35546 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
RetP35546 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RetP35546 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RetP35546 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RetP35546 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RetP35546 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.88□□□□□ -0.35
RetP35546 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
RetP35546 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RetP35546 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RetP35546 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.88□□□□□ -0.35
RetP35546 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RetP35546 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.88□□□□□ -0.35
RetP35546 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RetP35546 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RetP35546 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RetP35546 Mir6392-201ENSMUST00000184924 108 ntBASIC12.87□□□□□ -0.35
RetP35546 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.87□□□□□ -0.35
RetP35546 Gm10766-202ENSMUST00000194123 606 ntBASIC12.87□□□□□ -0.35
RetP35546 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.87□□□□□ -0.35
RetP35546 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.87□□□□□ -0.35
RetP35546 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.87□□□□□ -0.35
RetP35546 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RetP35546 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RetP35546 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
RetP35546 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RetP35546 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.87□□□□□ -0.35
RetP35546 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.86□□□□□ -0.35
RetP35546 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
RetP35546 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.86□□□□□ -0.35
RetP35546 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
RetP35546 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RetP35546 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.86□□□□□ -0.35
RetP35546 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.86□□□□□ -0.35
RetP35546 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RetP35546 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Gm17150-201ENSMUST00000165577 381 ntBASIC12.86□□□□□ -0.35
RetP35546 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.86□□□□□ -0.35
RetP35546 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.86□□□□□ -0.35
RetP35546 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.86□□□□□ -0.35
RetP35546 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.86□□□□□ -0.35
RetP35546 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RetP35546 Gm19220-201ENSMUST00000222682 803 ntBASIC12.86□□□□□ -0.35
RetP35546 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RetP35546 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RetP35546 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RetP35546 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RetP35546 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
RetP35546 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
RetP35546 BC001981-202ENSMUST00000191393 1545 ntBASIC12.85□□□□□ -0.35
RetP35546 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms