Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Gm25261-201ENSMUST00000157416 134 ntBASIC12.63□□□□□ -0.39
Sftpa1P35242 Mir5132-201ENSMUST00000175166 71 ntBASIC12.63□□□□□ -0.39
Sftpa1P35242 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.63□□□□□ -0.39
Sftpa1P35242 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.63□□□□□ -0.39
Sftpa1P35242 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.63□□□□□ -0.39
Sftpa1P35242 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.63□□□□□ -0.39
Sftpa1P35242 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.62□□□□□ -0.39
Sftpa1P35242 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.62□□□□□ -0.39
Sftpa1P35242 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sftpa1P35242 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.62□□□□□ -0.39
Sftpa1P35242 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.62□□□□□ -0.39
Sftpa1P35242 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Sftpa1P35242 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.62□□□□□ -0.39
Sftpa1P35242 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.62□□□□□ -0.39
Sftpa1P35242 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Gm37259-201ENSMUST00000193903 849 ntBASIC12.62□□□□□ -0.39
Sftpa1P35242 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.62□□□□□ -0.39
Sftpa1P35242 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.62□□□□□ -0.39
Sftpa1P35242 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.62□□□□□ -0.39
Sftpa1P35242 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sftpa1P35242 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.61□□□□□ -0.39
Sftpa1P35242 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sftpa1P35242 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sftpa1P35242 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.61□□□□□ -0.39
Sftpa1P35242 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.61□□□□□ -0.39
Sftpa1P35242 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.61□□□□□ -0.39
Sftpa1P35242 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Sftpa1P35242 Gm7029-201ENSMUST00000173226 450 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms