Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.1□□□□□ -0.15
Nfkb1P25799 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nfkb1P25799 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nfkb1P25799 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.1□□□□□ -0.15
Nfkb1P25799 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.1□□□□□ -0.15
Nfkb1P25799 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.1□□□□□ -0.15
Nfkb1P25799 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.1□□□□□ -0.15
Nfkb1P25799 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nfkb1P25799 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.1□□□□□ -0.15
Nfkb1P25799 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nfkb1P25799 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nfkb1P25799 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nfkb1P25799 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nfkb1P25799 Gm4984-201ENSMUST00000115987 360 ntBASIC14.09□□□□□ -0.15
Nfkb1P25799 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.09□□□□□ -0.15
Nfkb1P25799 Mir1894-201ENSMUST00000122802 81 ntBASIC14.09□□□□□ -0.15
Nfkb1P25799 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.09□□□□□ -0.15
Nfkb1P25799 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.09□□□□□ -0.15
Nfkb1P25799 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Gm27839-201ENSMUST00000184242 106 ntBASIC14.09□□□□□ -0.15
Nfkb1P25799 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Gm44719-201ENSMUST00000206404 149 ntBASIC14.09□□□□□ -0.15
Nfkb1P25799 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.09□□□□□ -0.15
Nfkb1P25799 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.09□□□□□ -0.15
Nfkb1P25799 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nfkb1P25799 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nfkb1P25799 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nfkb1P25799 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.09□□□□□ -0.15
Nfkb1P25799 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nfkb1P25799 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Nfkb1P25799 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nfkb1P25799 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nfkb1P25799 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nfkb1P25799 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.08□□□□□ -0.15
Nfkb1P25799 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nfkb1P25799 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nfkb1P25799 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nfkb1P25799 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.08□□□□□ -0.15
Nfkb1P25799 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nfkb1P25799 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nfkb1P25799 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Nfkb1P25799 Gm12928-201ENSMUST00000117115 573 ntBASIC14.08□□□□□ -0.16
Nfkb1P25799 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nfkb1P25799 Mir7085-201ENSMUST00000184353 66 ntBASIC14.08□□□□□ -0.16
Nfkb1P25799 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.08□□□□□ -0.16
Nfkb1P25799 Gm18062-201ENSMUST00000208020 547 ntBASIC14.08□□□□□ -0.16
Nfkb1P25799 Gm18055-201ENSMUST00000208254 547 ntBASIC14.08□□□□□ -0.16
Nfkb1P25799 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nfkb1P25799 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Nfkb1P25799 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nfkb1P25799 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.08□□□□□ -0.16
Nfkb1P25799 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.08□□□□□ -0.16
Nfkb1P25799 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nfkb1P25799 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms