Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm27430-201ENSMUST00000184585 107 ntBASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Gm33320-201ENSMUST00000192232 530 ntBASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Gm44333-201ENSMUST00000197168 107 ntBASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf1aP25118 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Gm15653-201ENSMUST00000119247 907 ntBASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Mir1897-201ENSMUST00000122581 272 ntBASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf1aP25118 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Gm27622-201ENSMUST00000183779 60 ntBASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf1aP25118 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1aP25118 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1aP25118 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1aP25118 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tnfrsf1aP25118 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1aP25118 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1aP25118 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1aP25118 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tnfrsf1aP25118 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms