Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pde6bP23440 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6bP23440 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6bP23440 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pde6bP23440 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6bP23440 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6bP23440 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pde6bP23440 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6bP23440 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pde6bP23440 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Pde6bP23440 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pde6bP23440 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.99□□□□□ -0.01
Pde6bP23440 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.99□□□□□ -0.01
Pde6bP23440 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.99□□□□□ -0.01
Pde6bP23440 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Gm15429-201ENSMUST00000151268 798 ntBASIC14.99□□□□□ -0.01
Pde6bP23440 Mir1982-201ENSMUST00000157368 74 ntBASIC14.99□□□□□ -0.01
Pde6bP23440 Gm27486-201ENSMUST00000184923 80 ntBASIC14.99□□□□□ -0.01
Pde6bP23440 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.99□□□□□ -0.01
Pde6bP23440 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.99□□□□□ -0.01
Pde6bP23440 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pde6bP23440 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.99□□□□□ -0.01
Pde6bP23440 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pde6bP23440 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6bP23440 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.99□□□□□ -0.01
Pde6bP23440 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pde6bP23440 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
Pde6bP23440 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.98□□□□□ -0.01
Pde6bP23440 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.98□□□□□ -0.01
Pde6bP23440 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Gm27772-201ENSMUST00000184900 187 ntBASIC14.98□□□□□ -0.01
Pde6bP23440 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.98□□□□□ -0.01
Pde6bP23440 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.98□□□□□ -0.01
Pde6bP23440 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.98□□□□□ -0.01
Pde6bP23440 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pde6bP23440 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pde6bP23440 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pde6bP23440 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pde6bP23440 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pde6bP23440 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.97□□□□□ -0.01
Pde6bP23440 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.97□□□□□ -0.01
Pde6bP23440 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pde6bP23440 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.97□□□□□ -0.01
Pde6bP23440 Gm43630-201ENSMUST00000201550 776 ntBASIC14.97□□□□□ -0.01
Pde6bP23440 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.97□□□□□ -0.01
Pde6bP23440 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms