Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Hoxc8P09025 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.49□□□□□ -0.09
Hoxc8P09025 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.49□□□□□ -0.09
Hoxc8P09025 Gm11978-201ENSMUST00000122315 466 ntBASIC14.49□□□□□ -0.09
Hoxc8P09025 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.49□□□□□ -0.09
Hoxc8P09025 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.49□□□□□ -0.09
Hoxc8P09025 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Hoxc8P09025 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.49□□□□□ -0.09
Hoxc8P09025 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Hoxc8P09025 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
Hoxc8P09025 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Hoxc8P09025 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Hoxc8P09025 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Hoxc8P09025 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.48□□□□□ -0.09
Hoxc8P09025 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Gm22323-201ENSMUST00000103832 109 ntBASIC14.48□□□□□ -0.09
Hoxc8P09025 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Gm38341-201ENSMUST00000195357 515 ntBASIC14.48□□□□□ -0.09
Hoxc8P09025 Gm45865-201ENSMUST00000211815 945 ntBASIC14.48□□□□□ -0.09
Hoxc8P09025 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.48□□□□□ -0.09
Hoxc8P09025 Gm9368-201ENSMUST00000219348 831 ntBASIC14.48□□□□□ -0.09
Hoxc8P09025 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Hoxc8P09025 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.48□□□□□ -0.09
Hoxc8P09025 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Hoxc8P09025 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.47□□□□□ -0.09
Hoxc8P09025 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Hoxc8P09025 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Hoxc8P09025 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.47□□□□□ -0.09
Hoxc8P09025 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.47□□□□□ -0.09
Hoxc8P09025 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Hoxc8P09025 Gm12363-201ENSMUST00000122250 668 ntBASIC14.47□□□□□ -0.09
Hoxc8P09025 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.47□□□□□ -0.09
Hoxc8P09025 Gm7809-201ENSMUST00000153199 742 ntBASIC14.47□□□□□ -0.09
Hoxc8P09025 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.47□□□□□ -0.09
Hoxc8P09025 Gm28693-202ENSMUST00000190758 331 ntBASIC14.47□□□□□ -0.09
Hoxc8P09025 Gm4857-201ENSMUST00000192718 785 ntBASIC14.47□□□□□ -0.09
Hoxc8P09025 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.47□□□□□ -0.09
Hoxc8P09025 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Gm24526-201ENSMUST00000082921 158 ntBASIC14.47□□□□□ -0.09
Hoxc8P09025 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Hoxc8P09025 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Hoxc8P09025 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.47□□□□□ -0.09
Hoxc8P09025 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Hoxc8P09025 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Hoxc8P09025 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.46□□□□□ -0.09
Hoxc8P09025 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Hoxc8P09025 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Hoxc8P09025 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms