Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ApoeP08226 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ApoeP08226 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ApoeP08226 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
ApoeP08226 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
ApoeP08226 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.98□□□□□ -0.33
ApoeP08226 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Gm28659-201ENSMUST00000188013 759 ntBASIC12.98□□□□□ -0.33
ApoeP08226 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.98□□□□□ -0.33
ApoeP08226 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.98□□□□□ -0.33
ApoeP08226 Gm18027-201ENSMUST00000218947 619 ntBASIC12.98□□□□□ -0.33
ApoeP08226 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.98□□□□□ -0.33
ApoeP08226 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ApoeP08226 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
ApoeP08226 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
ApoeP08226 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
ApoeP08226 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.97□□□□□ -0.33
ApoeP08226 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
ApoeP08226 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.97□□□□□ -0.33
ApoeP08226 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Gm15427-201ENSMUST00000117288 531 ntBASIC12.97□□□□□ -0.33
ApoeP08226 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.97□□□□□ -0.33
ApoeP08226 Gm13823-201ENSMUST00000119930 345 ntBASIC12.97□□□□□ -0.33
ApoeP08226 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.97□□□□□ -0.33
ApoeP08226 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.97□□□□□ -0.33
ApoeP08226 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ApoeP08226 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
ApoeP08226 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.97□□□□□ -0.33
ApoeP08226 Gm21362-201ENSMUST00000194272 928 ntBASIC12.97□□□□□ -0.33
ApoeP08226 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.97□□□□□ -0.33
ApoeP08226 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
ApoeP08226 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.97□□□□□ -0.33
ApoeP08226 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
ApoeP08226 Syt7-205ENSMUST00000224135 1557 ntBASIC12.97□□□□□ -0.33
ApoeP08226 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
ApoeP08226 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
ApoeP08226 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
ApoeP08226 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
ApoeP08226 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
ApoeP08226 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
ApoeP08226 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.96□□□□□ -0.33
ApoeP08226 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ApoeP08226 Gm14140-201ENSMUST00000119999 995 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms