Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.96□□□□□ -0.33
Krt1P04104 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Krt1P04104 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt1P04104 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt1P04104 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Krt1P04104 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt1P04104 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt1P04104 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Krt1P04104 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt1P04104 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.96□□□□□ -0.33
Krt1P04104 Gm27357-201ENSMUST00000183754 135 ntBASIC12.96□□□□□ -0.33
Krt1P04104 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt1P04104 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.96□□□□□ -0.33
Krt1P04104 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt1P04104 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.96□□□□□ -0.33
Krt1P04104 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt1P04104 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt1P04104 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Krt1P04104 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Krt1P04104 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Krt1P04104 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Krt1P04104 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Krt1P04104 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt1P04104 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt1P04104 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt1P04104 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.96□□□□□ -0.34
Krt1P04104 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Krt1P04104 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt1P04104 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.96□□□□□ -0.34
Krt1P04104 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt1P04104 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Krt1P04104 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Krt1P04104 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Krt1P04104 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Krt1P04104 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Syt7-205ENSMUST00000224135 1557 ntBASIC12.95□□□□□ -0.34
Krt1P04104 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.95□□□□□ -0.34
Krt1P04104 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.95□□□□□ -0.34
Krt1P04104 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.95□□□□□ -0.34
Krt1P04104 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Krt1P04104 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Krt1P04104 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Krt1P04104 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt1P04104 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.94□□□□□ -0.34
Krt1P04104 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Krt1P04104 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Krt1P04104 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.94□□□□□ -0.34
Krt1P04104 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Krt1P04104 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Krt1P04104 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.94□□□□□ -0.34
Krt1P04104 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Krt1P04104 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Krt1P04104 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.94□□□□□ -0.34
Krt1P04104 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.94□□□□□ -0.34
Krt1P04104 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.94□□□□□ -0.34
Krt1P04104 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Krt1P04104 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt1P04104 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Krt1P04104 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms