Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
P03980 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.6□□□□□ -0.71
P03980 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
P03980 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
P03980 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.6□□□□□ -0.71
P03980 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
P03980 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
P03980 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
P03980 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
P03980 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.6□□□□□ -0.71
P03980 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC10.59□□□□□ -0.71
P03980 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.59□□□□□ -0.71
P03980 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.59□□□□□ -0.71
P03980 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
P03980 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P03980 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
P03980 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P03980 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.59□□□□□ -0.71
P03980 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.59□□□□□ -0.71
P03980 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC10.59□□□□□ -0.71
P03980 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.59□□□□□ -0.71
P03980 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.59□□□□□ -0.71
P03980 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.59□□□□□ -0.71
P03980 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
P03980 AC158529.1-201ENSMUST00000223618 239 ntBASIC10.59□□□□□ -0.71
P03980 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.59□□□□□ -0.71
P03980 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
P03980 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
P03980 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.58□□□□□ -0.72
P03980 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P03980 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.58□□□□□ -0.72
P03980 Gm12017-201ENSMUST00000122453 1003 ntBASIC10.58□□□□□ -0.72
P03980 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.58□□□□□ -0.72
P03980 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.58□□□□□ -0.72
P03980 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
P03980 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.58□□□□□ -0.72
P03980 Gm18737-201ENSMUST00000173594 937 ntBASIC10.58□□□□□ -0.72
P03980 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC10.58□□□□□ -0.72
P03980 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 AA619741-201ENSMUST00000195095 646 ntBASIC10.58□□□□□ -0.72
P03980 Gm44719-201ENSMUST00000206404 149 ntBASIC10.58□□□□□ -0.72
P03980 Gm18027-201ENSMUST00000218947 619 ntBASIC10.58□□□□□ -0.72
P03980 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P03980 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
P03980 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC10.58□□□□□ -0.72
P03980 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
P03980 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms