Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a1P02463 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a1P02463 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a1P02463 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a1P02463 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a1P02463 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
Col4a1P02463 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a1P02463 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col4a1P02463 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Col4a1P02463 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.53■□□□□ 0.24
Col4a1P02463 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC16.53■□□□□ 0.24
Col4a1P02463 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Col4a1P02463 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col4a1P02463 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.53■□□□□ 0.24
Col4a1P02463 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Col4a1P02463 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.53■□□□□ 0.24
Col4a1P02463 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC16.53■□□□□ 0.24
Col4a1P02463 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC16.53■□□□□ 0.24
Col4a1P02463 Gm26185-201ENSMUST00000157692 266 ntBASIC16.53■□□□□ 0.24
Col4a1P02463 Gm22121-201ENSMUST00000175148 54 ntBASIC16.53■□□□□ 0.24
Col4a1P02463 Mir3102-201ENSMUST00000175555 104 ntBASIC16.53■□□□□ 0.24
Col4a1P02463 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.53■□□□□ 0.24
Col4a1P02463 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col4a1P02463 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a1P02463 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a1P02463 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.52■□□□□ 0.24
Col4a1P02463 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Col4a1P02463 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a1P02463 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a1P02463 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a1P02463 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a1P02463 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a1P02463 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a1P02463 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Col4a1P02463 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col4a1P02463 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Col4a1P02463 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a1P02463 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a1P02463 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.52■□□□□ 0.23
Col4a1P02463 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a1P02463 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a1P02463 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a1P02463 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.52■□□□□ 0.23
Col4a1P02463 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a1P02463 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a1P02463 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a1P02463 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a1P02463 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col4a1P02463 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.51■□□□□ 0.23
Col4a1P02463 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 CT009713.10-201ENSMUST00000225013 1986 ntBASIC16.51■□□□□ 0.23
Col4a1P02463 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.51■□□□□ 0.23
Col4a1P02463 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC16.51■□□□□ 0.23
Col4a1P02463 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Gm21769-201ENSMUST00000211922 111 ntBASIC16.51■□□□□ 0.23
Col4a1P02463 Gm5781-201ENSMUST00000219792 443 ntBASIC16.51■□□□□ 0.23
Col4a1P02463 AC093022.1-201ENSMUST00000226949 1072 ntBASIC16.51■□□□□ 0.23
Col4a1P02463 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col4a1P02463 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Col4a1P02463 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.51■□□□□ 0.23
Col4a1P02463 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col4a1P02463 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Gm2606-201ENSMUST00000100754 1002 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col4a1P02463 Rn7s1-201ENSMUST00000174924 300 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Rn7s2-201ENSMUST00000175032 300 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Gm26461-201ENSMUST00000175064 290 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Gm4768-201ENSMUST00000206199 686 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Gm7293-201ENSMUST00000216682 1007 ntBASIC16.5■□□□□ 0.23
Col4a1P02463 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms