Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.57□□□□□ -0.4
P01852 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.57□□□□□ -0.4
P01852 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P01852 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P01852 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
P01852 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
P01852 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P01852 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
P01852 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
P01852 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
P01852 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P01852 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
P01852 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P01852 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
P01852 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.56□□□□□ -0.4
P01852 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
P01852 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.56□□□□□ -0.4
P01852 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.56□□□□□ -0.4
P01852 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
P01852 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
P01852 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Gm6912-201ENSMUST00000117218 544 ntBASIC12.56□□□□□ -0.4
P01852 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.56□□□□□ -0.4
P01852 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.56□□□□□ -0.4
P01852 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Gm28760-201ENSMUST00000185995 736 ntBASIC12.56□□□□□ -0.4
P01852 Gm29741-201ENSMUST00000192667 421 ntBASIC12.56□□□□□ -0.4
P01852 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.56□□□□□ -0.4
P01852 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.56□□□□□ -0.4
P01852 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.56□□□□□ -0.4
P01852 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.56□□□□□ -0.4
P01852 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
P01852 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
P01852 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.55□□□□□ -0.4
P01852 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P01852 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.55□□□□□ -0.4
P01852 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.55□□□□□ -0.4
P01852 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.55□□□□□ -0.4
P01852 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.55□□□□□ -0.4
P01852 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.55□□□□□ -0.4
P01852 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
P01852 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.55□□□□□ -0.4
P01852 Gm7063-201ENSMUST00000186840 981 ntBASIC12.55□□□□□ -0.4
P01852 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.55□□□□□ -0.4
P01852 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
P01852 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.55□□□□□ -0.4
P01852 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
P01852 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.55□□□□□ -0.4
P01852 Gm6218-201ENSMUST00000219812 628 ntBASIC12.55□□□□□ -0.4
P01852 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms