Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.02□□□□□ -0.81
TcraP01849 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
TcraP01849 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
TcraP01849 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
TcraP01849 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC10.01□□□□□ -0.81
TcraP01849 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.01□□□□□ -0.81
TcraP01849 Gm7862-201ENSMUST00000121461 292 ntBASIC10.01□□□□□ -0.81
TcraP01849 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
TcraP01849 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Gm18195-201ENSMUST00000207604 706 ntBASIC10.01□□□□□ -0.81
TcraP01849 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.01□□□□□ -0.81
TcraP01849 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC10.01□□□□□ -0.81
TcraP01849 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.01□□□□□ -0.81
TcraP01849 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.01□□□□□ -0.81
TcraP01849 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
TcraP01849 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
TcraP01849 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
TcraP01849 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
TcraP01849 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
TcraP01849 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Gm38273-201ENSMUST00000194987 2382 ntBASIC10□□□□□ -0.81
TcraP01849 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC10□□□□□ -0.81
TcraP01849 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10□□□□□ -0.81
TcraP01849 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC10□□□□□ -0.81
TcraP01849 Gm5682-201ENSMUST00000173402 505 ntBASIC10□□□□□ -0.81
TcraP01849 Gm4691-201ENSMUST00000182339 1000 ntBASIC10□□□□□ -0.81
TcraP01849 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC10□□□□□ -0.81
TcraP01849 Gm2451-201ENSMUST00000199447 999 ntBASIC10□□□□□ -0.81
TcraP01849 Gm10290-201ENSMUST00000200451 999 ntBASIC10□□□□□ -0.81
TcraP01849 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10□□□□□ -0.81
TcraP01849 Gm5864-201ENSMUST00000202263 970 ntBASIC10□□□□□ -0.81
TcraP01849 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
TcraP01849 Gm10060-201ENSMUST00000212002 111 ntBASIC10□□□□□ -0.81
TcraP01849 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 AV026068-213ENSMUST00000223675 1171 ntBASIC10□□□□□ -0.81
TcraP01849 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10□□□□□ -0.81
TcraP01849 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
TcraP01849 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
TcraP01849 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms