Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igh-VJ558P01758 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.86□□□□□ -0.51
Igh-VJ558P01758 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Gm27989-201ENSMUST00000184721 107 ntBASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igh-VJ558P01758 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Gm9522-201ENSMUST00000182394 926 ntBASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Gm27772-201ENSMUST00000184900 187 ntBASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.85□□□□□ -0.51
Igh-VJ558P01758 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igh-VJ558P01758 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.84□□□□□ -0.51
Igh-VJ558P01758 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igh-VJ558P01758 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms