Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.16□□□□□ -0.14
CopeO89079 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.16□□□□□ -0.14
CopeO89079 Gm37714-201ENSMUST00000194742 342 ntBASIC14.16□□□□□ -0.14
CopeO89079 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CopeO89079 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.16□□□□□ -0.14
CopeO89079 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.16□□□□□ -0.14
CopeO89079 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CopeO89079 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CopeO89079 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CopeO89079 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CopeO89079 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CopeO89079 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CopeO89079 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.15□□□□□ -0.14
CopeO89079 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
CopeO89079 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.15□□□□□ -0.14
CopeO89079 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.15□□□□□ -0.14
CopeO89079 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Rprl2-201ENSMUST00000157150 290 ntBASIC14.15□□□□□ -0.14
CopeO89079 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.15□□□□□ -0.14
CopeO89079 Gm27631-201ENSMUST00000184163 466 ntBASIC14.15□□□□□ -0.14
CopeO89079 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.15□□□□□ -0.14
CopeO89079 Gm6443-201ENSMUST00000203599 874 ntBASIC14.15□□□□□ -0.14
CopeO89079 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.15□□□□□ -0.14
CopeO89079 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CopeO89079 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CopeO89079 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CopeO89079 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.15□□□□□ -0.14
CopeO89079 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CopeO89079 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CopeO89079 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CopeO89079 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CopeO89079 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.14□□□□□ -0.15
CopeO89079 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.14□□□□□ -0.15
CopeO89079 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.14□□□□□ -0.15
CopeO89079 Gm18049-201ENSMUST00000208909 581 ntBASIC14.14□□□□□ -0.15
CopeO89079 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.14□□□□□ -0.15
CopeO89079 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.14□□□□□ -0.15
CopeO89079 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CopeO89079 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CopeO89079 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopeO89079 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CopeO89079 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopeO89079 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.13□□□□□ -0.15
CopeO89079 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CopeO89079 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms