Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ubr1O70481 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ubr1O70481 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Ubr1O70481 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC17.45■□□□□ 0.38
Ubr1O70481 Gm15897-201ENSMUST00000117770 1486 ntBASIC17.45■□□□□ 0.38
Ubr1O70481 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ubr1O70481 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC17.44■□□□□ 0.38
Ubr1O70481 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ubr1O70481 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.44■□□□□ 0.38
Ubr1O70481 Gm6082-201ENSMUST00000215204 454 ntBASIC17.44■□□□□ 0.38
Ubr1O70481 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC17.44■□□□□ 0.38
Ubr1O70481 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ubr1O70481 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Ubr1O70481 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Ubr1O70481 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ubr1O70481 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubr1O70481 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.44■□□□□ 0.38
Ubr1O70481 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ubr1O70481 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ubr1O70481 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Gm14381-201ENSMUST00000122105 414 ntBASIC17.43■□□□□ 0.38
Ubr1O70481 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC17.43■□□□□ 0.38
Ubr1O70481 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Gm30285-201ENSMUST00000214614 422 ntBASIC17.43■□□□□ 0.38
Ubr1O70481 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ubr1O70481 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ubr1O70481 AC154725.1-201ENSMUST00000224826 1961 ntBASIC17.43■□□□□ 0.38
Ubr1O70481 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ubr1O70481 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC17.43■□□□□ 0.38
Ubr1O70481 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ubr1O70481 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ubr1O70481 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Ubr1O70481 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Gm20482-202ENSMUST00000174729 825 ntBASIC17.42■□□□□ 0.38
Ubr1O70481 Gm2383-201ENSMUST00000181461 807 ntBASIC17.42■□□□□ 0.38
Ubr1O70481 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC17.42■□□□□ 0.38
Ubr1O70481 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC17.42■□□□□ 0.38
Ubr1O70481 Gm37489-201ENSMUST00000191883 159 ntBASIC17.42■□□□□ 0.38
Ubr1O70481 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC17.42■□□□□ 0.38
Ubr1O70481 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.42■□□□□ 0.38
Ubr1O70481 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubr1O70481 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubr1O70481 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubr1O70481 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms