Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pde6dO55057 Gm7222-201ENSMUST00000117512 906 ntBASIC10.82□□□□□ -0.68
Pde6dO55057 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pde6dO55057 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC10.82□□□□□ -0.68
Pde6dO55057 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.82□□□□□ -0.68
Pde6dO55057 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.82□□□□□ -0.68
Pde6dO55057 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.82□□□□□ -0.68
Pde6dO55057 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Pde6dO55057 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Pde6dO55057 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.82□□□□□ -0.68
Pde6dO55057 Gm13233-201ENSMUST00000118760 1443 ntBASIC10.82□□□□□ -0.68
Pde6dO55057 Gm13244-201ENSMUST00000118855 1446 ntBASIC10.82□□□□□ -0.68
Pde6dO55057 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Pde6dO55057 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Pde6dO55057 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Pde6dO55057 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Pde6dO55057 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.81□□□□□ -0.68
Pde6dO55057 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pde6dO55057 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.81□□□□□ -0.68
Pde6dO55057 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC10.81□□□□□ -0.68
Pde6dO55057 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC10.81□□□□□ -0.68
Pde6dO55057 Gm5479-201ENSMUST00000160578 435 ntBASIC10.81□□□□□ -0.68
Pde6dO55057 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC10.81□□□□□ -0.68
Pde6dO55057 Gm6089-201ENSMUST00000197666 938 ntBASIC10.81□□□□□ -0.68
Pde6dO55057 AC147366.1-201ENSMUST00000227671 852 ntBASIC10.81□□□□□ -0.68
Pde6dO55057 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Pde6dO55057 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pde6dO55057 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pde6dO55057 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Pde6dO55057 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Pde6dO55057 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pde6dO55057 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.8□□□□□ -0.68
Pde6dO55057 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.8□□□□□ -0.68
Pde6dO55057 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Pde6dO55057 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Gm12895-201ENSMUST00000122214 226 ntBASIC10.8□□□□□ -0.68
Pde6dO55057 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.8□□□□□ -0.68
Pde6dO55057 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.8□□□□□ -0.68
Pde6dO55057 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC10.8□□□□□ -0.68
Pde6dO55057 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Pde6dO55057 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pde6dO55057 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms