Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Gm7993-201ENSMUST00000200970 1384 ntBASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
B020004C17RikJ3QP07 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Gm16479-201ENSMUST00000121706 932 ntBASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Gm25668-201ENSMUST00000157700 129 ntBASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Gm4768-201ENSMUST00000206199 686 ntBASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
B020004C17RikJ3QP07 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.21■□□□□ 0.02
B020004C17RikJ3QP07 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
B020004C17RikJ3QP07 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
B020004C17RikJ3QP07 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
B020004C17RikJ3QP07 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
B020004C17RikJ3QP07 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
B020004C17RikJ3QP07 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Gm3890-201ENSMUST00000182416 207 ntBASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Gm19163-201ENSMUST00000223313 780 ntBASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
B020004C17RikJ3QP07 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms