Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Gm5687-201ENSMUST00000118252 640 ntBASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Gm8652-201ENSMUST00000181363 964 ntBASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Gm27839-201ENSMUST00000184242 106 ntBASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Gm10012-201ENSMUST00000078252 192 ntBASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm17535J3KMR8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Gm17535J3KMR8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.52□□□□□ -0.09
Gm17535J3KMR8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm11814-201ENSMUST00000119515 929 ntBASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm13829-201ENSMUST00000119600 138 ntBASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm6152-201ENSMUST00000151704 340 ntBASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm38671-201ENSMUST00000200573 130 ntBASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm8598-201ENSMUST00000221184 836 ntBASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm17535J3KMR8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm17535J3KMR8 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm17535J3KMR8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms