Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcf11G3X9Z4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Gm22323-201ENSMUST00000103832 109 ntBASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Gm12241-201ENSMUST00000118330 726 ntBASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Gm42627-201ENSMUST00000197347 224 ntBASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcf11G3X9Z4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Gm12539-201ENSMUST00000121549 1098 ntBASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcf11G3X9Z4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Gm5637-201ENSMUST00000153890 1119 ntBASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcf11G3X9Z4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Gm8805-201ENSMUST00000117848 313 ntBASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Gm4986-201ENSMUST00000119731 549 ntBASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Gm38297-201ENSMUST00000195122 1057 ntBASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Gm4768-201ENSMUST00000206199 686 ntBASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcf11G3X9Z4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcf11G3X9Z4 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcf11G3X9Z4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcf11G3X9Z4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Pcf11G3X9Z4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 Gm9368-201ENSMUST00000219348 831 ntBASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 AC069562.3-201ENSMUST00000225387 587 ntBASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcf11G3X9Z4 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms