Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Gm5620-201ENSMUST00000077991 1348 ntBASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Gm43036-201ENSMUST00000200594 373 ntBASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Gm10268-201ENSMUST00000085340 555 ntBASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Klri1-201ENSMUST00000088046 838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Nkx1-1G3UXB3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Gm13297-201ENSMUST00000120205 934 ntBASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Gm9517-201ENSMUST00000195021 874 ntBASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Nkx1-1G3UXB3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Gm31123-201ENSMUST00000192094 666 ntBASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Gm37989-201ENSMUST00000195202 803 ntBASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Gm45733-201ENSMUST00000212988 437 ntBASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Nkx1-1G3UXB3 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms