Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Gm15371-201ENSMUST00000117057 784 ntBASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Gm3695-201ENSMUST00000087222 1009 ntBASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tmf1B9EKI3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Gm13886-201ENSMUST00000117876 1183 ntBASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Gm8463-201ENSMUST00000208573 613 ntBASIC18.52■□□□□ 0.56
Tmf1B9EKI3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 AC125117.1-201ENSMUST00000228121 468 ntBASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Rassf8-202ENSMUST00000058538 1131 ntBASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Tmf1B9EKI3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
Tmf1B9EKI3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tmf1B9EKI3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC18.52■□□□□ 0.55
Tmf1B9EKI3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tmf1B9EKI3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Gm5912-201ENSMUST00000122282 1438 ntBASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Gm12960-201ENSMUST00000120017 1066 ntBASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Gm44397-201ENSMUST00000195950 113 ntBASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Gm12626-201ENSMUST00000117339 1983 ntBASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Gm12623-201ENSMUST00000119849 1983 ntBASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Gm13730-201ENSMUST00000121036 1462 ntBASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tmf1B9EKI3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Mir6420-201ENSMUST00000185032 102 ntBASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Gm29608-201ENSMUST00000190444 463 ntBASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Gm43630-201ENSMUST00000201550 776 ntBASIC18.5■□□□□ 0.55
Tmf1B9EKI3 Gm42550-201ENSMUST00000201553 960 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms