Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm9132-201ENSMUST00000210182 832 ntBASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm10313-201ENSMUST00000095320 1002 ntBASIC7.04□□□□□ -1.28
Ubr4A2AN08 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm12015-201ENSMUST00000117065 843 ntBASIC7.04□□□□□ -1.28
Ubr4A2AN08 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm43520-201ENSMUST00000197996 164 ntBASIC7.04□□□□□ -1.28
Ubr4A2AN08 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm9252-201ENSMUST00000172364 1602 ntBASIC7.04□□□□□ -1.28
Ubr4A2AN08 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm21009-201ENSMUST00000197169 1669 ntBASIC7.04□□□□□ -1.28
Ubr4A2AN08 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Mir705-201ENSMUST00000102058 82 ntBASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm14524-201ENSMUST00000121066 683 ntBASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC7.04□□□□□ -1.28
Ubr4A2AN08 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm29615-201ENSMUST00000185371 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm28224-201ENSMUST00000186078 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm29001-201ENSMUST00000186177 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm28292-201ENSMUST00000186593 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm28101-201ENSMUST00000187608 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm29076-201ENSMUST00000187689 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm28302-201ENSMUST00000187931 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm28646-201ENSMUST00000188220 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm28205-201ENSMUST00000189177 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm29032-201ENSMUST00000189797 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm28695-201ENSMUST00000190300 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm37448-201ENSMUST00000192795 697 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm17870-201ENSMUST00000219489 1174 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm43399-201ENSMUST00000202546 2374 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm12380-201ENSMUST00000119012 544 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm9916-201ENSMUST00000192943 1228 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Gm4366-201ENSMUST00000201488 1342 ntBASIC7.03□□□□□ -1.28
Ubr4A2AN08 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC7.03□□□□□ -1.28
Ubr4A2AN08 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms