Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cfap99A0A140LIX9 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Gm15957-201ENSMUST00000118893 974 ntBASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Mir1982-201ENSMUST00000157368 74 ntBASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Gm6007-201ENSMUST00000208170 823 ntBASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cfap99A0A140LIX9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cfap99A0A140LIX9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Mir1894-201ENSMUST00000122802 81 ntBASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Gm45841-201ENSMUST00000207700 164 ntBASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cfap99A0A140LIX9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms