Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm5493S4R2D1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Gm7284-201ENSMUST00000131667 944 ntBASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Gm10275-202ENSMUST00000168697 495 ntBASIC11.63□□□□□ -0.55
Gm5493S4R2D1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Gm10275-201ENSMUST00000092620 635 ntBASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm5493S4R2D1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Gm25990-201ENSMUST00000102440 86 ntBASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Gm5493S4R2D1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.61□□□□□ -0.55
Gm5493S4R2D1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Gm5493S4R2D1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms