Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Gm5566-201ENSMUST00000116118 459 ntBASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Gm29741-201ENSMUST00000192667 421 ntBASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
H2afb3S4R1G7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Gm13015-201ENSMUST00000118674 204 ntBASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Gm9719-201ENSMUST00000162765 543 ntBASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
H2afb3S4R1G7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC12.36□□□□□ -0.43
H2afb3S4R1G7 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms