Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Cldn13Q9Z0S4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.27□□□□□ -0.44
Cldn13Q9Z0S4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn13Q9Z0S4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn13Q9Z0S4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.27□□□□□ -0.44
Cldn13Q9Z0S4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn13Q9Z0S4 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn13Q9Z0S4 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.27□□□□□ -0.44
Cldn13Q9Z0S4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Cldn13Q9Z0S4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Gm27838-201ENSMUST00000184829 128 ntBASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cldn13Q9Z0S4 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Gm2445-201ENSMUST00000182798 989 ntBASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Gm27437-201ENSMUST00000183429 107 ntBASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.26□□□□□ -0.45
Cldn13Q9Z0S4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms