Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Gm2451-201ENSMUST00000199447 999 ntBASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Gm10290-201ENSMUST00000200451 999 ntBASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 AC154757.1-201ENSMUST00000228289 336 ntBASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hmg20aQ9DC33 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmg20aQ9DC33 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Hmg20aQ9DC33 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmg20aQ9DC33 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hmg20aQ9DC33 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmg20aQ9DC33 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.52□□□□□ -0.4
Hmg20aQ9DC33 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.52□□□□□ -0.4
Hmg20aQ9DC33 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.52□□□□□ -0.4
Hmg20aQ9DC33 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.52□□□□□ -0.4
Hmg20aQ9DC33 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hmg20aQ9DC33 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Hmg20aQ9DC33 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Gm18489-201ENSMUST00000172565 551 ntBASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Gm5682-201ENSMUST00000173402 505 ntBASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Gm28033-201ENSMUST00000184224 96 ntBASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Gm37153-201ENSMUST00000193637 231 ntBASIC12.52□□□□□ -0.41
Hmg20aQ9DC33 Gm6089-201ENSMUST00000197666 938 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms