Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Mir6956-201ENSMUST00000183598 62 ntBASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Gm27772-201ENSMUST00000184900 187 ntBASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp4bQ9D8B3 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Gm18905-201ENSMUST00000205454 928 ntBASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp4bQ9D8B3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Gm4875-201ENSMUST00000118257 786 ntBASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.29■□□□□ 0.36
Chmp4bQ9D8B3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp4bQ9D8B3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms